C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | cancer susceptibility candidate 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000127475  |
Casc4-005 |
ENSMUSG00000060227 |
10090 | + |
2:121867129-121900208  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000687 | CIL_000687_0002 | CGP | 2:121545529-121936220 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000299957
|
CASC4-001 | protein_coding | Homo_sapiens | 0 | 573 |
|
ENST00000345795
|
CASC4-002 | protein_coding | Homo_sapiens | 0 | 573 |
|
ENST00000429162
|
CASC4-004 | processed_transcript | Homo_sapiens | 0 | 488 |
|
ENST00000456608
|
CASC4P1-001 | processed_pseudogene | Homo_sapiens | 0 | 483 |
|
ENST00000557945
|
CASC4-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 573 |
|
ENST00000558735
|
CASC4-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 383 |
|
ENST00000559222
|
CASC4-006 | protein_coding | Homo_sapiens | 0 | 381 |
