C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B cell CLL/lymphoma 11A (zinc finger protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127494 Bcl11a-002 ENSMUSG00000000861 10090 + 11:24142379-24163291 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000127494
Transcript ID Placenta
ENSMUST00000127494 0.130±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PG CIL_0008PG_0002 VISTA 11:23715166-24317101
CIL_0009DA CIL_0009DA_0002 VISTA 11:23762086-24363576
CIL_0008GM CIL_0008GM_0002 VISTA 11:23795054-24396665
CIL_0008WW CIL_0008WW_0002 VISTA 11:24012332-24614280
CIL_000881 CIL_000881_0002 VISTA 11:24029867-24633908
CIL_0007LM CIL_0007LM_0002 UCNEbase 11:24062983-26981636
CIL_0008BH CIL_0008BH_0002 VISTA 11:24070835-24671855

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335712 BCL11A-001 protein_coding Homo_sapiens 0 427
ENST00000356842 BCL11A-002 protein_coding Homo_sapiens 0 427
ENST00000358510 BCL11A-006 protein_coding Homo_sapiens 0 265
ENST00000359629 BCL11A-003 protein_coding Homo_sapiens 0 427
ENST00000477659 BCL11A-008 processed_transcript Homo_sapiens 0 429
ENST00000489516 BCL11A-007 processed_transcript Homo_sapiens 0 427
ENST00000492272 BCL11A-010 processed_transcript Homo_sapiens 0 431

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