C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GPN-loop GTPase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127608 Gpn3-002 ENSMUSG00000029464 10090 + 5:122371876-122382841 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverLungOvaryTestisENSMUST00000127608
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Testis
ENSMUST00000127608 9.235±0.22 5.766±0.00 14.562±3.96 4.464±0.83 2.400±0.11 5.646±0.78 6.002±0.00 5.839±0.67 7.650±1.30 22.499±1.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YU CIL_0008YU_0002 VISTA 5:121792218-122394768
CIL_0004MV CIL_0004MV_0002 CGP 5:122371876-122406179

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228827 GPN3-001 protein_coding Homo_sapiens 0 704
ENST00000537466 GPN3-002 protein_coding Homo_sapiens 0 625
ENST00000543199 GPN3-201 protein_coding Homo_sapiens 0 628
ENST00000547323 GPN3-005 retained_intron Homo_sapiens 0 211
ENST00000549963 GPN3-011 protein_coding Homo_sapiens 4e-29 132
ENST00000550228 GPN3-004 protein_coding Homo_sapiens 0 381
ENST00000550974 GPN3-007 protein_coding Homo_sapiens 0 604

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