C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: a disintegrin and metallopeptidase domain 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127974 Adam17-003 ENSMUSG00000052593 10090 - 12:21323517-21373593 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungOvaryPlacentaTestisENSMUST00000127974
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Ovary Placenta Testis
ENSMUST00000127974 9.273±1.84 16.885±2.73 11.055±2.56 10.009±3.49 8.840±0.00 14.261±4.11 13.553±3.06 2.491±0.00 0.791±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057M CIL_00057M_0002 CGP 12:21286297-21323605
CIL_0007AU CIL_0007AU_0003 CGP 12:21316392-21373632
CIL_0001MI CIL_0001MI_0002 CGP 12:21323509-21417637

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000135391 adam17b-201 protein_coding Danio_rerio 4e-38 165
ENSDART00000153339 adam17b-001 protein_coding Danio_rerio 4e-38 165
ENST00000310823 ADAM17-001 protein_coding Homo_sapiens 0 2867
ENST00000470914 IAH1-001 protein_coding Homo_sapiens 2.00386e-43 182
ENST00000478059 ADAM17-002 retained_intron Homo_sapiens 0 695
ENST00000484826 IAH1-014 retained_intron Homo_sapiens 0.00000002 64
ENST00000497134 ADAM17-003 protein_coding Homo_sapiens 0 854
ENST00000497473 IAH1-003 protein_coding Homo_sapiens 9.94922e-44 182
ENST00000618923 ADAM17-201 protein_coding Homo_sapiens 0 808

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