C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, AMPA3 (alpha 3)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128197 Gria3-005 ENSMUSG00000001986 10090 + X:41400854-41613099 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000128197
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000128197 0.179±0.10 1.263±0.36 0.552±0.02 0.458±0.10 0.237±0.06 0.103±0.00 0.401±0.08 0.145±0.08 0.730±0.16 0.045±0.01 0.625±0.20 0.077±0.05 0.084±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U7 CIL_0001U7_0002 CGP X:41400854-41920674

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000043180 gria3b-001 protein_coding Danio_rerio 0 1005
ENST00000282499 GRIA4-201 protein_coding Homo_sapiens 0 407
ENST00000393127 GRIA4-202 protein_coding Homo_sapiens 0 407
ENST00000479118 GRIA3-004 processed_transcript Homo_sapiens 0 758
ENST00000525187 GRIA4-006 protein_coding Homo_sapiens 0 407
ENST00000530497 GRIA4-005 protein_coding Homo_sapiens 0 407
ENST00000541091 GRIA3-002 protein_coding Homo_sapiens 0 2939
ENST00000611689 GRIA3-006 protein_coding Homo_sapiens 0 473
ENST00000616590 GRIA3-007 protein_coding Homo_sapiens 0 582
ENST00000620443 GRIA3-001 protein_coding Homo_sapiens 0 2939
ENST00000620581 GRIA3-201 protein_coding Homo_sapiens 0 2939
ENST00000622768 GRIA3-202 protein_coding Homo_sapiens 0 2939

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