C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 22, member 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128392 Slc22a23-006 ENSMUSG00000038267 10090 - 13:34182867-34193531 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonOvaryPlacentaTestisENSMUST00000128392
Transcript ID Brain Colon Ovary Placenta Testis
ENSMUST00000128392 17.865±0.00 39.964±0.00 4.429±1.04 18.610±0.00 2.612±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081I CIL_00081I_0002 VISTA 13:33848088-34450616
CIL_000823 CIL_000823_0002 VISTA 13:33947185-34549843
CIL_00015Z CIL_00015Z_0003 CGP 13:34162964-34345182
CIL_0003IW CIL_0003IW_0002 CGP 13:34179158-34652681

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380302 SLC22A23-009 protein_coding Homo_sapiens 0 610
ENST00000406686 SLC22A23-006 protein_coding Homo_sapiens 0 610
ENST00000467177 SLC22A23-010 protein_coding Homo_sapiens 7.00649e-45 185
ENST00000482874 SLC22A23-013 retained_intron Homo_sapiens 8.00001e-42 174
ENST00000485307 SLC22A23-007 protein_coding Homo_sapiens 0 213
ENST00000490273 SLC22A23-005 protein_coding Homo_sapiens 0 610
ENST00000497691 SLC22A23-008 nonsense_mediated_decay Homo_sapiens 0 610

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