C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor II H, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128420 Gtf2h1-003 ENSMUSG00000006599 10090 + 7:46801687-46822909 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleENSMUST00000128420
Transcript ID Breast Muscle
ENSMUST00000128420 2.081±0.00 1.598±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041D CIL_00041D_0003 CGP 7:46760466-46823800
CIL_000445 CIL_000445_0002 CGP 7:46796103-46855627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000439 IEA core TFIIH complex
GO:0005634 IDA nucleus
GO:0006289 IEA nucleotide-excision repair

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265963 GTF2H1-001 protein_coding Homo_sapiens 0 1794
ENST00000418116 GTF2H1-017 retained_intron Homo_sapiens 0 1677
ENST00000453096 GTF2H1-002 protein_coding Homo_sapiens 0 1794
ENST00000524753 GTF2H1-014 protein_coding Homo_sapiens 0 798
ENST00000525831 GTF2H1-006 protein_coding Homo_sapiens 0 224
ENST00000526282 GTF2H1-013 retained_intron Homo_sapiens 0 477
ENST00000526461 GTF2H1-007 retained_intron Homo_sapiens 0 224
ENST00000526630 GTF2H1-011 protein_coding Homo_sapiens 0 833
ENST00000528427 GTF2H1-012 retained_intron Homo_sapiens 0 315
ENST00000530496 GTF2H1-010 protein_coding Homo_sapiens 0 1123
ENST00000531757 GTF2H1-004 processed_transcript Homo_sapiens 0 224
ENST00000532227 GTF2H1-008 retained_intron Homo_sapiens 0 224
ENST00000534641 GTF2H1-003 protein_coding Homo_sapiens 0 2017
ENST00000543932 GTF2H1-018 retained_intron Homo_sapiens 0 676
ENST00000585803 RP11-795H16.2-001 processed_pseudogene Homo_sapiens 0 1437
ENST00000607664 GTF2H1-019 retained_intron Homo_sapiens 3e-21 106

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