C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transport and golgi organization 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128580 Tango2-002 ENSMUSG00000013539 10090 - 16:18300825-18324450 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonLiverMuscleOvaryPlacentaTestisENSMUST00000128580
Transcript ID Adipose Adrenal Bladder Breast Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000128580 1.995±0.00 8.073±2.15 2.445±0.00 4.634±0.51 4.649±1.35 5.267±0.00 2.426±0.00 3.931±2.58 2.650±0.00 1.079±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095F CIL_00095F_0002 VISTA 16:18254168-18857637
CIL_00099J CIL_00099J_0002 VISTA 16:18285741-18886132
CIL_0008BW CIL_0008BW_0002 VISTA 16:18293232-18893684

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327374 TANGO2-003 protein_coding Homo_sapiens 0 778
ENST00000398042 TANGO2-007 protein_coding Homo_sapiens 0 346
ENST00000399807 TANGO2-004 nonsense_mediated_decay Homo_sapiens 9e-22 110
ENST00000401833 TANGO2-005 protein_coding Homo_sapiens 7e-22 110
ENST00000401886 TANGO2-001 protein_coding Homo_sapiens 0 346
ENST00000411907 TANGO2-010 processed_transcript Homo_sapiens 0 346
ENST00000420290 TANGO2-201 protein_coding Homo_sapiens 0 346
ENST00000430807 TANGO2-012 nonsense_mediated_decay Homo_sapiens 0 346
ENST00000432198 TANGO2-006 protein_coding Homo_sapiens 0 346
ENST00000432883 TANGO2-202 protein_coding Homo_sapiens 0 346
ENST00000434168 TANGO2-014 protein_coding Homo_sapiens 0 640
ENST00000434570 TANGO2-203 protein_coding Homo_sapiens 8e-22 110
ENST00000444651 TANGO2-015 nonsense_mediated_decay Homo_sapiens 0 346
ENST00000447208 TANGO2-204 protein_coding Homo_sapiens 0 468
ENST00000450019 TANGO2-002 nonsense_mediated_decay Homo_sapiens 0 346
ENST00000450664 TANGO2-011 protein_coding Homo_sapiens 0 536
ENST00000456048 TANGO2-205 protein_coding Homo_sapiens 9e-22 110
ENST00000462579 TANGO2-019 retained_intron Homo_sapiens 0 346
ENST00000471707 TANGO2-018 retained_intron Homo_sapiens 0 346
ENST00000475446 TANGO2-009 processed_transcript Homo_sapiens 0 219
ENST00000479679 TANGO2-008 processed_transcript Homo_sapiens 0 219
ENST00000484373 TANGO2-021 retained_intron Homo_sapiens 0 468
ENST00000485715 TANGO2-013 processed_transcript Homo_sapiens 0 470

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