C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin interaction motif containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128641 Uimc1-003 ENSMUSG00000025878 10090 - 13:55077457-55086192 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098R CIL_00098R_0002 VISTA 13:54491283-55092527
CIL_0001A8 CIL_0001A8_0002 CGP 13:55005985-55100300
CIL_0000OX CIL_0000OX_0004 CGP 13:55027880-55134825

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000111140 RPL29-201 protein_coding Danio_rerio 0 202
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 388
ENST00000377227 UIMC1-001 protein_coding Homo_sapiens 0 207
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 318
ENST00000417486 UIMC1-002 retained_intron Homo_sapiens 0 207
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 307
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 302
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 348
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 315
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 0 241
ENST00000465069 RPL29P25-001 processed_pseudogene Homo_sapiens 0 211
ENST00000465434 RPL29P24-001 processed_pseudogene Homo_sapiens 0 296
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 374
ENST00000470368 RPL29P30-002 processed_transcript Homo_sapiens 0 287
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 374
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 353
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 379
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 0 196
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 0 200
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 0 224
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 5e-19 99
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 272
ENST00000488409 RPL29P2-001 transcribed_processed_pseudogene Homo_sapiens 0 267
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 374
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 372
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 374
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 0 217
ENST00000496414 RPL29P30-003 processed_transcript Homo_sapiens 0 287
ENST00000498671 RPL29P2-002 processed_transcript Homo_sapiens 0 274
ENST00000505879 UIMC1-009 processed_transcript Homo_sapiens 1e-16 90
ENST00000506128 UIMC1-006 protein_coding Homo_sapiens 0 207
ENST00000507513 UIMC1-007 protein_coding Homo_sapiens 7e-36 154
ENST00000509236 UIMC1-014 protein_coding Homo_sapiens 0 207
ENST00000511320 UIMC1-004 protein_coding Homo_sapiens 0 207
ENST00000512031 UIMC1-003 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000515488 UIMC1-013 retained_intron Homo_sapiens 0 207

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