C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat, SAM and U-box domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128671 Wdsub1-005 ENSMUSG00000026988 10090 - 2:59876668-59882574 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000128671
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000128671 7.145±1.27 6.603±1.67 4.659±1.12 4.893±0.52 3.411±0.44 3.763±0.57 1.492±0.31 6.191±1.24 4.111±0.00 5.393±0.00 2.736±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083G CIL_00083G_0002 VISTA 2:59262344-59863132
CIL_0007X8 CIL_0007X8_0002 VISTA 2:59297936-59901449
CIL_0008PS CIL_0008PS_0002 VISTA 2:59368906-59972125
CIL_0008P7 CIL_0008P7_0002 VISTA 2:59528773-60129361
CIL_0005U3 CIL_0005U3_0002 CGP 2:59612042-59882591
CIL_0005U2 CIL_0005U2_0002 CGP 2:59852364-60209839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358147 WDSUB1-004 protein_coding Homo_sapiens 0 411
ENST00000359774 WDSUB1-001 protein_coding Homo_sapiens 0 411
ENST00000392796 WDSUB1-002 protein_coding Homo_sapiens 0 411
ENST00000409124 WDSUB1-003 protein_coding Homo_sapiens 0 411
ENST00000409990 WDSUB1-005 protein_coding Homo_sapiens 0 411

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