C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128830 Pop5-004 ENSMUSG00000060152 10090 + 5:115238035-115240944 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000128830
Transcript ID Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000128830 5.285±1.03 12.951±0.00 37.892±0.00 3.834±0.00 14.310±3.60 18.782±1.51 15.626±6.87 24.575±22.16 2.748±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000171 ISA ribonuclease MRP activity
GO:0000172 ISA ribonuclease MRP complex
GO:0004526 IDA ribonuclease P activity
GO:0005655 IDA nucleolar ribonuclease P complex
GO:0006364 ISA rRNA processing
GO:0008033 IDA tRNA processing
GO:0090501 IDA RNA phosphodiester bond hydrolysis
GO:0090502 IDA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

No Homologs available.

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