C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | synovial apoptosis inhibitor 1, synoviolin | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000129081  |
Syvn1-006 |
ENSMUSG00000024807 |
10090 | + |
19:6046638-6049203  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008W1 | CIL_0008W1_0002 | VISTA | 19:5510095-6112698 |
| CIL_0002MM | CIL_0002MM_0002 | CGP | 19:6046576-6057751 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000151 | ISO | ubiquitin ligase complex |
| GO:0001701 | IMP | in utero embryonic development |
| GO:0004842 | ISO | ubiquitin-protein transferase activity |
| GO:0005783 | ISO | endoplasmic reticulum |
| GO:0006986 | ISO | response to unfolded protein |
| GO:0016567 | ISO | protein ubiquitination |
| GO:1902236 | IMP | negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000294256
|
SYVN1-002 | protein_coding | Homo_sapiens | 0 | 736 |
|
ENST00000307289
|
SYVN1-011 | protein_coding | Homo_sapiens | 0 | 579 |
|
ENST00000377190
|
SYVN1-001 | protein_coding | Homo_sapiens | 0 | 736 |
|
ENST00000449943
|
SYVN1-003 | retained_intron | Homo_sapiens | 0 | 658 |
|
ENST00000525874
|
SYVN1-008 | retained_intron | Homo_sapiens | 0 | 429 |
|
ENST00000526060
|
SYVN1-004 | protein_coding | Homo_sapiens | 0 | 734 |
|
ENST00000526121
|
SYVN1-014 | processed_transcript | Homo_sapiens | 0.0000000004 | 69 |
|
ENST00000527142
|
SYVN1-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 652 |
|
ENST00000528487
|
SYVN1-005 | protein_coding | Homo_sapiens | 0 | 435 |
|
ENST00000529207
|
SYVN1-006 | retained_intron | Homo_sapiens | 0 | 350 |
|
ENST00000531018
|
SYVN1-007 | protein_coding | Homo_sapiens | 0 | 507 |
|
ENST00000532771
|
SYVN1-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 553 |
|
ENST00000533685
|
SYVN1-013 | retained_intron | Homo_sapiens | 0 | 283 |
