| Transcript ID | Liver | Muscle | Placenta |
|---|---|---|---|
| ENSMUST00000129179 | 0.161±0.16 | 0.010±0.00 | 0.417±0.11 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | RAN binding protein 17 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000129179  |
Ranbp17-002 |
ENSMUSG00000040594 |
10090 | - |
11:33296394-33513642  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00092S | CIL_00092S_0002 | VISTA | 11:32891798-33493112 |
| CIL_00097F | CIL_00097F_0002 | VISTA | 11:32999598-33601607 |
| CIL_00088M | CIL_00088M_0002 | VISTA | 11:33042866-33643782 |
| CIL_000977 | CIL_000977_0002 | VISTA | 11:33092412-33693558 |
| CIL_00098H | CIL_00098H_0002 | VISTA | 11:33099828-33701076 |
| CIL_0008SG | CIL_0008SG_0002 | VISTA | 11:33129906-33731024 |
| CIL_0007NP | CIL_0007NP_0002 | UCNEbase | 11:33192157-33430428 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IEA | nucleus |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0006913 | TAS | nucleocytoplasmic transport |
| GO:0008536 | TAS | Ran GTPase binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000389118
|
RANBP17-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 2313 |
|
ENST00000443155
|
RANBP17-006 | retained_intron | Homo_sapiens | 0 | 996 |
|
ENST00000518492
|
RANBP17-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 329 |
|
ENST00000519130
|
RANBP17-004 | retained_intron | Homo_sapiens | 0 | 782 |
|
ENST00000519256
|
RANBP17-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 2303 |
|
ENST00000519944
|
RANBP17-011 | protein_coding | Homo_sapiens | 0 | 475 |
|
ENST00000519949
|
RANBP17-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 2961 |
|
ENST00000520586
|
RANBP17-016 | processed_transcript | Homo_sapiens | 0 | 483 |
|
ENST00000520864
|
RANBP17-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1637 |
|
ENST00000520879
|
RANBP17-013 | processed_transcript | Homo_sapiens | 0 | 664 |
|
ENST00000521165
|
RANBP17-014 | retained_intron | Homo_sapiens | 0 | 294 |
|
ENST00000521759
|
RANBP17-010 | processed_transcript | Homo_sapiens | 0 | 442 |
|
ENST00000522066
|
RANBP17-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 2134 |
|
ENST00000522380
|
RANBP17-022 | processed_transcript | Homo_sapiens | 0 | 697 |
|
ENST00000522533
|
RANBP17-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 2305 |
|
ENST00000522734
|
RANBP17-012 | protein_coding | Homo_sapiens | 0 | 385 |
|
ENST00000523189
|
RANBP17-001 | protein_coding | Homo_sapiens | 0 | 2141 |
|
ENST00000523665
|
RANBP17-017 | processed_transcript | Homo_sapiens | 0 | 375 |
|
ENST00000524364
|
RANBP17-018 | processed_transcript | Homo_sapiens | 0 | 736 |
|
ENST00000616486
|
RANBP17-201 | protein_coding | Homo_sapiens | 0 | 675 |
