C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histocompatibility 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129439 H13-004 ENSMUSG00000019188 10090 + 2:152691839-152696241 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0002 VISTA 2:152099091-152699726
CIL_0008K5 CIL_0008K5_0002 VISTA 2:152434876-153035572
CIL_00089Z CIL_00089Z_0002 VISTA 2:152488201-153091382
CIL_0008N4 CIL_0008N4_0002 VISTA 2:152517372-153118197
CIL_0001A0 CIL_0001A0_0002 CGP 2:152626951-152708670

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335574 HM13-009 protein_coding Homo_sapiens 1e-34 152
ENST00000340852 HM13-011 protein_coding Homo_sapiens 1e-34 152
ENST00000344042 HM13-014 protein_coding Homo_sapiens 2e-34 150
ENST00000398174 HM13-012 protein_coding Homo_sapiens 2e-34 152
ENST00000460389 HM13-002 processed_transcript Homo_sapiens 7e-35 152
ENST00000468559 HM13-024 processed_transcript Homo_sapiens 9e-37 158
ENST00000469097 HM13-006 processed_transcript Homo_sapiens 5e-35 152
ENST00000469126 HM13-019 processed_transcript Homo_sapiens 5e-35 152
ENST00000472128 HM13-008 processed_transcript Homo_sapiens 5e-35 152
ENST00000474466 HM13-023 processed_transcript Homo_sapiens 3e-35 152
ENST00000483310 HM13-001 processed_transcript Homo_sapiens 1e-36 158
ENST00000487964 HM13-021 processed_transcript Homo_sapiens 6e-35 152
ENST00000492709 HM13-020 processed_transcript Homo_sapiens 8e-35 152
ENST00000494153 HM13-004 processed_transcript Homo_sapiens 5e-35 152
ENST00000619859 HM13-027 protein_coding Homo_sapiens 2e-36 156

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