C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor A (SII), 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129745 Tcea2-003 ENSMUSG00000059540 10090 + 2:181681190-181688051 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyLiverLungMuscleOvaryPlacentaENSMUST00000129745
Transcript ID Adipose Breast Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000129745 2.335±0.99 2.103±0.36 1.435±0.26 0.228±0.00 2.494±0.00 0.960±0.00 3.052±0.15 0.412±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V3 CIL_0003V3_0002 CGP 2:181669836-181688071
CIL_0007I6 CIL_0007I6_0002 CGP 2:181680310-181693977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0008270 IEA zinc ion binding
GO:0032784 IEA regulation of DNA-templated transcription, elongation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000450454 TCEA3-001 protein_coding Homo_sapiens 0 228
ENST00000476978 TCEA3-002 protein_coding Homo_sapiens 4.00001e-41 172

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