C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELK3, member of ETS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129827 Elk3-005 ENSMUSG00000008398 10090 - 10:93249323-93310811 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000129827
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000129827 11.270±1.80 19.581±3.56 4.981±0.31 2.770±0.28 14.544±6.85 6.239±1.28 6.560±1.92 6.662±1.41 1.997±0.54 23.601±8.88 1.723±0.48 14.392±6.51 12.405±6.87 0.938±0.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001525 IMP angiogenesis
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0030154 IBA cell differentiation
GO:0042060 IMP wound healing
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228741 ELK3-001 protein_coding Homo_sapiens 0 717
ENST00000547249 ELK3-003 protein_coding Homo_sapiens 5e-38 161
ENST00000547860 ELK3-004 protein_coding Homo_sapiens 0 592
ENST00000549985 ELK3-005 nonsense_mediated_decay Homo_sapiens 0 726
ENST00000552142 ELK3-002 protein_coding Homo_sapiens 0 298

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