C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129944 Rpl5-004 ENSMUSG00000058558 10090 + 5:107902121-107903885 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CB CIL_0007CB_0003 CGP 5:107900502-107987085

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315741 RPL5-006 protein_coding Homo_sapiens 0 305
ENST00000370321 RPL5-001 protein_coding Homo_sapiens 0 305
ENST00000392009 RPL5P5-001 processed_pseudogene Homo_sapiens 0 250
ENST00000396820 RPL5P8-001 processed_pseudogene Homo_sapiens 2e-18 97
ENST00000425640 RPL5P6-001 processed_pseudogene Homo_sapiens 0 228
ENST00000426545 RPL5P34-001 processed_pseudogene Homo_sapiens 0 267
ENST00000437011 RPL5P27-001 processed_pseudogene Homo_sapiens 0 231
ENST00000441148 RPL5P25-001 processed_pseudogene Homo_sapiens 0 261
ENST00000454085 RPL5P32-001 processed_pseudogene Homo_sapiens 0 255
ENST00000460716 RPL5P1-001 processed_pseudogene Homo_sapiens 0 283
ENST00000461952 RPL5-004 retained_intron Homo_sapiens 9e-29 132
ENST00000463742 RPL5P24-001 processed_pseudogene Homo_sapiens 0 267
ENST00000465511 RPL5P30-001 processed_pseudogene Homo_sapiens 0 272
ENST00000469685 RPL5P17-001 processed_pseudogene Homo_sapiens 0 244
ENST00000470843 RPL5-003 nonsense_mediated_decay Homo_sapiens 0 241
ENST00000477071 RPL5P12-001 processed_pseudogene Homo_sapiens 0 283
ENST00000482972 RPL5P29-001 processed_pseudogene Homo_sapiens 0 261
ENST00000487833 RPL5P33-001 processed_pseudogene Homo_sapiens 0 255
ENST00000493817 RPL5P3-001 processed_pseudogene Homo_sapiens 0 270
ENST00000496040 RPL5P23-001 processed_pseudogene Homo_sapiens 0 219
ENST00000498068 RPL5P11-001 processed_pseudogene Homo_sapiens 0 250

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