C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi to ER traffic protein 4 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130326 Get4-003 ENSMUSG00000025858 10090 + 5:139252370-139267141 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000130326
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000130326 33.801±15.71 199.387±45.35 34.645±15.80 55.714±13.73 11.264±0.43 28.581±4.23 19.741±3.53 37.701±20.88 148.938±44.23 27.855±2.87 50.998±9.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018J CIL_00018J_0002 CGP 5:139200637-139270051
CIL_0008V5 CIL_0008V5_0002 VISTA 5:139236245-139837428
CIL_0008DL CIL_0008DL_0002 VISTA 5:139238772-139840184
CIL_000186 CIL_000186_0002 CGP 5:139252324-139325622

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265857 GET4-001 protein_coding Homo_sapiens 0 931
ENST00000407192 GET4-002 protein_coding Homo_sapiens 0 579
ENST00000412734 GET4-006 protein_coding Homo_sapiens 0 449
ENST00000426056 GET4-004 protein_coding Homo_sapiens 0 281
ENST00000441491 GET4-003 protein_coding Homo_sapiens 0 315
ENST00000457861 SUN1-033 nonsense_mediated_decay Homo_sapiens 0 579

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