C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane emp24 protein transport domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130621 Tmed4-003 ENSMUSG00000004394 10090 - 11:6271661-6274870 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonOvaryPlacentaENSMUST00000130621
Transcript ID Adipose Bladder Brain Breast Colon Ovary Placenta
ENSMUST00000130621 9.910±0.00 10.874±0.00 26.394±15.08 9.820±0.97 7.760±0.20 20.886±0.00 8.948±2.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000J4 CIL_0000J4_0002 CGP 11:6258919-6274870
CIL_0000J7 CIL_0000J7_0002 CGP 11:6270369-6356642

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289577 TMED4-005 protein_coding Homo_sapiens 0 217
ENST00000457408 TMED4-001 protein_coding Homo_sapiens 0 647
ENST00000477639 TMED4-004 retained_intron Homo_sapiens 8.99998e-41 172

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