C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130671 Abcc1-010 ENSMUSG00000023088 10090 + 16:14361558-14473902 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverOvaryTestisENSMUST00000130671
Transcript ID Adrenal Breast Kidney Liver Ovary Testis
ENSMUST00000130671 1.444±0.00 4.299±0.35 1.045±0.00 0.208±0.00 2.628±0.26 0.856±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MS CIL_0006MS_0002 CGP 16:14299244-14475737

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005887 IDA integral component of plasma membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399408 ABCC1-201 protein_coding Homo_sapiens 0 2507
ENST00000399410 ABCC1-001 protein_coding Homo_sapiens 0 4239
ENST00000572053 ABCC1-005 nonsense_mediated_decay Homo_sapiens 0 547
ENST00000572882 ABCC1-007 protein_coding Homo_sapiens 0 2124
ENST00000574224 ABCC1-002 retained_intron Homo_sapiens 0 1206
ENST00000574761 ABCC1-006 retained_intron Homo_sapiens 0 676
ENST00000575422 ABCC1-003 retained_intron Homo_sapiens 0 732
ENST00000621144 ABCC1-202 protein_coding Homo_sapiens 0 4244
ENST00000621659 ABCC1-203 protein_coding Homo_sapiens 0 1821
ENST00000622828 ABCC1-204 protein_coding Homo_sapiens 0 2507

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