C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exosome component 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130843 Exosc3-002 ENSMUSG00000028322 10090 - 4:45317489-45320604 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000130843
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000130843 11.963±3.33 32.107±8.38 9.013±0.00 8.665±1.18 10.840±1.43 13.043±3.17 4.836±1.66 8.069±2.48 8.161±3.40 11.018±1.51 18.335±4.92 7.275±0.00 12.506±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081A CIL_00081A_0002 VISTA 4:45205842-45807105
CIL_0006TH CIL_0006TH_0002 CGP 4:45297127-45342732
CIL_0006TG CIL_0006TG_0002 CGP 4:45316613-45379759

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327304 EXOSC3-001 protein_coding Homo_sapiens 0 625
ENST00000396521 EXOSC3-002 protein_coding Homo_sapiens 0 416
ENST00000448649 EXOSC3P1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000465229 EXOSC3-005 nonsense_mediated_decay Homo_sapiens 0 416
ENST00000465860 EXOSC3-007 retained_intron Homo_sapiens 0 472
ENST00000482614 EXOSC3-008 processed_transcript Homo_sapiens 0 429
ENST00000489414 EXOSC3-009 processed_transcript Homo_sapiens 0 429
ENST00000490516 EXOSC3-004 processed_transcript Homo_sapiens 0 220
ENST00000496910 EXOSC3-006 retained_intron Homo_sapiens 0 261
ENST00000540557 RP11-613M10.9-001 nonsense_mediated_decay Homo_sapiens 0 219

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