C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4930447C04 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131033 4930447C04Rik-002 ENSMUSG00000021098 10090 - 12:72906234-72917857 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000131033
Transcript ID Adipose Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000131033 0.090±0.00 0.865±0.21 0.165±0.12 0.023±0.00 0.040±0.00 0.244±0.08 0.034±0.02 0.112±0.01 0.499±0.48 0.797±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MW CIL_0008MW_0002 VISTA 12:72750612-73352572
CIL_0000S6 CIL_0000S6_0002 CGP 12:72761211-72940774
CIL_0000RZ CIL_0000RZ_0002 CGP 12:72881109-72944899

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0007275 IEA multicellular organismal development
GO:0051090 NAS regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321731 C14orf39-001 protein_coding Homo_sapiens 0 595
ENST00000555476 C14orf39-004 protein_coding Homo_sapiens 0 381
ENST00000556799 C14orf39-005 protein_coding Homo_sapiens 0 265

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