C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SH3-domain binding protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000132047  |
Sh3bp1-006 |
ENSMUSG00000022436 |
10090 | + |
15:78899768-78912051  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00099H | CIL_00099H_0002 | VISTA | 15:78863840-79464236 |
| CIL_0008KJ | CIL_0008KJ_0002 | VISTA | 15:78865517-79466323 |
| CIL_0008BX | CIL_0008BX_0002 | VISTA | 15:78873761-79474273 |
| CIL_0008KA | CIL_0008KA_0002 | VISTA | 15:78875821-79476550 |
| CIL_00040D | CIL_00040D_0002 | CGP | 15:78877190-78919517 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005737 | IEA | cytoplasm |
| GO:0007165 | IEA | signal transduction |
| GO:0017124 | IPI | SH3 domain binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000357436
|
SH3BP1-001 | protein_coding | Homo_sapiens | 0 | 1812 |
|
ENST00000417536
|
SH3BP1-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 1640 |
|
ENST00000451997
|
SH3BP1-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 1574 |
|
ENST00000466097
|
SH3BP1-005 | retained_intron | Homo_sapiens | 0 | 667 |
|
ENST00000469947
|
SH3BP1-003 | retained_intron | Homo_sapiens | 0 | 1338 |
|
ENST00000495174
|
SH3BP1-006 | processed_transcript | Homo_sapiens | 0 | 1053 |
