C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10653
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132250 Gm10653-002 ENSMUSG00000074250 10090 - 9:62841477-62862024 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003W4 CIL_0003W4_0002 CGP 9:62791832-62852006
CIL_0008FO CIL_0008FO_0002 VISTA 9:62808235-63410238
CIL_00098T CIL_00098T_0002 VISTA 9:62831587-63433435
CIL_0004FC CIL_0004FC_0003 CGP 9:62838785-62875918

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249806 CLN6-001 protein_coding Homo_sapiens 0 254
ENST00000343262 RPS2-001 protein_coding Homo_sapiens 0 800
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 614
ENST00000428058 CTD-2666L21.2-001 processed_pseudogene Homo_sapiens 0 651
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 595
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 623
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 488
ENST00000438210 RP3-342P20.2-001 processed_pseudogene Homo_sapiens 0 684
ENST00000447422 RP11-109P14.8-001 processed_pseudogene Homo_sapiens 0 411
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 488
ENST00000468126 RP11-324J13.1-001 processed_pseudogene Homo_sapiens 0 612
ENST00000474589 RP11-713P14.1-001 processed_pseudogene Homo_sapiens 0 470
ENST00000478038 RPS2P44-001 processed_pseudogene Homo_sapiens 0 492
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 608
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 473
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 619
ENST00000538696 CLN6-004 protein_coding Homo_sapiens 0 254
ENST00000564752 CLN6-006 protein_coding Homo_sapiens 4e-31 139
ENST00000565471 CLN6-008 protein_coding Homo_sapiens 0 254
ENST00000566347 CLN6-005 protein_coding Homo_sapiens 0 254
ENST00000567060 CLN6-003 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 582

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