C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | solute carrier family 35, member C2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000132270  |
Slc35c2-004 |
ENSMUSG00000017664 |
10090 | - |
2:165276554-165287824  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007BF | CIL_0007BF_0002 | CGP | 2:165111507-165287869 |
| CIL_0006G4 | CIL_0006G4_0002 | CGP | 2:165276554-165326479 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005793 | ISO | endoplasmic reticulum-Golgi intermediate compartment |
| GO:0005801 | ISO | cis-Golgi network |
| GO:0010629 | IDA | negative regulation of gene expression |
| GO:0036065 | IDA | fucosylation |
| GO:0036066 | IDA | protein O-linked fucosylation |
| GO:0045747 | IDA | positive regulation of Notch signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000243896
|
SLC35C2-002 | protein_coding | Homo_sapiens | 0 | 1096 |
|
ENST00000317734
|
SLC35C2-201 | protein_coding | Homo_sapiens | 0 | 1096 |
|
ENST00000372227
|
SLC35C2-003 | protein_coding | Homo_sapiens | 0 | 1096 |
|
ENST00000372230
|
SLC35C2-013 | protein_coding | Homo_sapiens | 0 | 1096 |
|
ENST00000420518
|
SLC35C2-006 | protein_coding | Homo_sapiens | 0 | 335 |
|
ENST00000426556
|
RP11-716A19.3-001 | processed_pseudogene | Homo_sapiens | 0 | 577 |
|
ENST00000480329
|
SLC35C2-009 | processed_transcript | Homo_sapiens | 0 | 658 |
|
ENST00000481809
|
SLC35C2-011 | processed_transcript | Homo_sapiens | 0 | 357 |
|
ENST00000484318
|
SLC35C2-012 | processed_transcript | Homo_sapiens | 0 | 850 |
|
ENST00000487729
|
SLC35C2-010 | processed_transcript | Homo_sapiens | 0 | 688 |
|
ENST00000493599
|
SLC35C2-004 | processed_transcript | Homo_sapiens | 0 | 396 |
|
ENST00000543605
|
SLC35C2-001 | protein_coding | Homo_sapiens | 0 | 771 |
