C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 20708
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132298 Gm20708-001 ENSMUSG00000093485 10090 + 11:117809668-117839904 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000132298
Transcript ID Brain Testis
ENSMUST00000132298 0.827±0.00 0.958±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YS CIL_0007YS_0002 VISTA 11:117565410-118167678
CIL_0004UI CIL_0004UI_0002 CGP 11:117797660-117814283

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225777 SYNGR2-001 protein_coding Homo_sapiens 2e-31 141
ENST00000585591 SYNGR2-009 protein_coding Homo_sapiens 2e-31 141
ENST00000588282 SYNGR2-003 protein_coding Homo_sapiens 3e-30 137
ENST00000589168 SYNGR2-004 protein_coding Homo_sapiens 8e-27 126
ENST00000589183 SYNGR2-007 nonsense_mediated_decay Homo_sapiens 4e-31 139
ENST00000589711 SYNGR2-002 protein_coding Homo_sapiens 3e-31 141
ENST00000591770 SYNGR2-008 retained_intron Homo_sapiens 1e-30 137

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