C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4 (anion exchanger), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132612 Slc4a3-002 ENSMUSG00000006576 10090 + 1:75546644-75560881 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000132612
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000132612 2.008±0.96 24.793±4.57 2.396±0.44 8.135±4.90 1.021±0.19 1.579±0.44 10.588±5.84 1.119±0.39 0.162±0.08 1.732±0.24 0.426±0.09 4.894±1.58 0.722±0.60 0.824±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_00082R CIL_00082R_0002 VISTA 1:75469003-76073592
CIL_0006O3 CIL_0006O3_0002 CGP 1:75521529-75562172
CIL_0008ED CIL_0008ED_0002 VISTA 1:75532718-76135169
CIL_0006O4 CIL_0006O4_0002 CGP 1:75546266-77515088

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273063 SLC4A3-001 protein_coding Homo_sapiens 0 2928
ENST00000317151 SLC4A3-002 protein_coding Homo_sapiens 0 2928
ENST00000358055 SLC4A3-009 protein_coding Homo_sapiens 0 2928
ENST00000373760 SLC4A3-010 protein_coding Homo_sapiens 0 2928
ENST00000413743 SLC4A3-008 protein_coding Homo_sapiens 0 407
ENST00000416910 SLC4A3-011 nonsense_mediated_decay Homo_sapiens 0 1797
ENST00000425141 SLC4A3-004 nonsense_mediated_decay Homo_sapiens 0 2933
ENST00000444906 SLC4A3-005 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000497589 SLC4A3-003 processed_transcript Homo_sapiens 0 383

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