C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133320 Atp5f1-002 ENSMUSG00000000563 10090 - 3:105942702-105959276 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverOvaryPlacentaTestisENSMUST00000133320
Transcript ID Adipose Bladder Brain Breast Heart Liver Ovary Placenta Testis
ENSMUST00000133320 30.222±0.00 31.957±6.74 87.289±0.00 80.586±0.00 113.783±0.00 58.030±9.53 121.562±0.00 60.620±35.02 33.145±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000276 IBA mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0015986 IBA ATP synthesis coupled proton transport
GO:0046933 IBA proton-transporting ATP synthase activity, rotational mechanism

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369721 ATP5F1-004 processed_transcript Homo_sapiens 0 525
ENST00000369722 ATP5F1-001 protein_coding Homo_sapiens 0 693
ENST00000397288 ATP5F1P4-001 processed_pseudogene Homo_sapiens 0 514
ENST00000464154 ATP5F1-002 processed_transcript Homo_sapiens 0 399
ENST00000468818 ATP5F1-006 processed_transcript Homo_sapiens 0 416
ENST00000483994 ATP5F1-005 protein_coding Homo_sapiens 0 520
ENST00000567330 ATP5F1P7-001 processed_pseudogene Homo_sapiens 0 575
ENST00000567372 RP11-421N8.1-001 processed_pseudogene Homo_sapiens 0 390

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