C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133553 Mrps11-002 ENSMUSG00000030611 10090 + 7:78783359-78792987 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000133553
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000133553 5.625±1.29 21.292±0.00 5.983±1.00 11.110±1.03 5.003±1.00 8.912±0.00 8.017±0.89 9.042±4.16 4.953±0.00 6.790±1.91 16.484±5.70 9.871±3.26 7.228±1.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AZ CIL_0001AZ_0002 CGP 7:78192362-78783531
CIL_00011G CIL_00011G_0002 CGP 7:78775236-78792989
CIL_00011H CIL_00011H_0002 CGP 7:78783119-78847236

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325844 MRPS11-001 protein_coding Homo_sapiens 0 470
ENST00000353598 MRPS11-002 protein_coding Homo_sapiens 0 357
ENST00000558406 MRPS11-010 retained_intron Homo_sapiens 0 470
ENST00000558548 MRPS11-006 retained_intron Homo_sapiens 0 252
ENST00000559323 MRPS11-008 retained_intron Homo_sapiens 0 470
ENST00000560708 MRPS11-004 nonsense_mediated_decay Homo_sapiens 0 300
ENST00000561262 MRPS11-003 retained_intron Homo_sapiens 0 230

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