C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 9, X chromosome
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133997 Usp9x-005 ENSMUSG00000031010 10090 + X:13160857-13169898 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000133997
Transcript ID Placenta
ENSMUST00000133997 45.325±3.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QE CIL_0005QE_0002 CGP X:12675369-13173328
CIL_0005QB CIL_0005QB_0002 CGP X:13071498-13294052

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IGI in utero embryonic development
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0009791 IMP post-embryonic development
GO:0021698 IMP cerebellar cortex structural organization
GO:0021766 IMP hippocampus development
GO:0045177 IDA apical part of cell
GO:0048675 IMP axon extension
GO:0071560 IMP cellular response to transforming growth factor beta stimulus
GO:1990138 IGI neuron projection extension

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324545 USP9X-003 protein_coding Homo_sapiens 0 2178
ENST00000338981 USP9Y-001 protein_coding Homo_sapiens 0 1005
ENST00000378308 USP9X-001 protein_coding Homo_sapiens 0 1166
ENST00000426564 USP9Y-002 processed_transcript Homo_sapiens 0 1005
ENST00000453031 USP9Y-005 protein_coding Homo_sapiens 0 525
ENST00000485180 USP9X-010 retained_intron Homo_sapiens 0 636
ENST00000625141 USP9Y-201 protein_coding Homo_sapiens 0 1005

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