C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cornichon homolog 4 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134115 Cnih4-001 ENSMUSG00000062169 10090 + 1:181150931-181168994 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000134115
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000134115 8.925±1.96 7.669±0.50 9.145±0.31 5.648±2.38 7.378±0.93 10.690±1.39 9.492±0.51 10.248±1.87 4.473±1.71 8.866±0.98 7.320±0.51 11.995±3.15 7.453±3.28 2.630±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IP CIL_0008IP_0002 VISTA 1:180955937-181559663
CIL_0005S3 CIL_0005S3_0002 CGP 1:181093423-181168994
CIL_0000C0 CIL_0000C0_0003 CGP 1:181150931-181211552

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366856 CNIH4-005 protein_coding Homo_sapiens 0 518
ENST00000366857 CNIH4-002 protein_coding Homo_sapiens 0 335
ENST00000366858 CNIH4-004 protein_coding Homo_sapiens 0 335
ENST00000366860 CNIH4-006 processed_transcript Homo_sapiens 0 507
ENST00000406554 RP1-177A13.1-001 processed_pseudogene Homo_sapiens 0 335
ENST00000465271 CNIH4-001 protein_coding Homo_sapiens 0 760
ENST00000468318 CNIH4-003 processed_transcript Homo_sapiens 0 534
ENST00000477413 CNIH4-007 processed_transcript Homo_sapiens 1e-25 121

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