C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone deacetylase 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134258 Hdac7-011 ENSMUSG00000022475 10090 - 15:97801282-97807984 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OC CIL_0002OC_0002 CGP 15:97744770-97792692
CIL_0003DF CIL_0003DF_0003 CGP 15:97784355-97844502
CIL_0003DI CIL_0003DI_0003 CGP 15:97792664-97910630

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000080059 HDAC7-001 protein_coding Homo_sapiens 0 608
ENST00000225983 HDAC5-003 protein_coding Homo_sapiens 1e-18 100
ENST00000354334 HDAC7-002 protein_coding Homo_sapiens 0 608
ENST00000380610 HDAC7-029 protein_coding Homo_sapiens 0 608
ENST00000427332 HDAC7-013 protein_coding Homo_sapiens 0 608
ENST00000459625 HDAC7-007 retained_intron Homo_sapiens 0 403
ENST00000470668 HDAC7-005 retained_intron Homo_sapiens 0 403
ENST00000477203 HDAC7-030 nonsense_mediated_decay Homo_sapiens 0 608
ENST00000477937 HDAC7-026 processed_transcript Homo_sapiens 0 472
ENST00000488927 HDAC7-027 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000548080 HDAC7-031 protein_coding Homo_sapiens 0 398
ENST00000548938 HDAC7-003 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000552960 HDAC7-028 protein_coding Homo_sapiens 0 608
ENST00000586802 HDAC5-002 protein_coding Homo_sapiens 8e-19 100
ENST00000588419 HDAC5-012 retained_intron Homo_sapiens 2e-19 100
ENST00000592385 HDAC5-004 retained_intron Homo_sapiens 6e-19 100
ENST00000593013 HDAC5-005 retained_intron Homo_sapiens 1e-18 99

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