C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: potassium channel tetramerisation domain containing 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134532 Kctd10-003 ENSMUSG00000001098 10090 - 5:114364462-114380489 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000134532
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000134532 15.587±0.00 38.721±0.00 68.298±6.30 19.084±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VO CIL_0001VO_0002 CGP 5:114254164-114364576
CIL_0001GP CIL_0001GP_0003 CGP 5:114314941-114380515
CIL_0001GM CIL_0001GM_0003 CGP 5:114363567-114421168

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008150 ND biological_process
GO:0036038 IDA TCTN-B9D complex
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228495 KCTD10-001 protein_coding Homo_sapiens 0 832
ENST00000440541 KCTD10-002 nonsense_mediated_decay Homo_sapiens 0 1225
ENST00000535546 KCTD10-012 protein_coding Homo_sapiens 0 616
ENST00000535747 KCTD10-010 retained_intron Homo_sapiens 0 361
ENST00000537165 KCTD10-003 nonsense_mediated_decay Homo_sapiens 0 767
ENST00000538161 KCTD10-005 processed_transcript Homo_sapiens 0 747
ENST00000538377 KCTD10-009 retained_intron Homo_sapiens 0 361
ENST00000540089 KCTD10-007 protein_coding Homo_sapiens 0 835
ENST00000540355 KCTD10-013 protein_coding Homo_sapiens 0 555
ENST00000540402 KCTD10-014 retained_intron Homo_sapiens 0 503
ENST00000540411 KCTD10-004 protein_coding Homo_sapiens 0 431
ENST00000542262 KCTD10-016 protein_coding Homo_sapiens 0 370
ENST00000542858 KCTD10-015 protein_coding Homo_sapiens 0 361
ENST00000542954 KCTD10-011 protein_coding Homo_sapiens 0 614
ENST00000545759 KCTD10-006 retained_intron Homo_sapiens 0 678

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