C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methionine-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134778 Mars-004 ENSMUSG00000040354 10090 - 10:127296226-127297764 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENSMUST00000134778
Transcript ID Brain Placenta
ENSMUST00000134778 31.652±0.00 53.988±21.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003A8 CIL_0003A8_0002 CGP 10:127281956-127296288
CIL_0003A7 CIL_0003A7_0002 CGP 10:127290774-127311786
CIL_00039K CIL_00039K_0002 CGP 10:127296221-127329943

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262027 MARS-003 protein_coding Homo_sapiens 0 490
ENST00000537638 MARS-002 nonsense_mediated_decay Homo_sapiens 0 444
ENST00000545888 MARS-004 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000547665 MARS-033 protein_coding Homo_sapiens 0 215
ENST00000548944 MARS-034 protein_coding Homo_sapiens 1e-31 139
ENST00000551172 MARS-031 nonsense_mediated_decay Homo_sapiens 0 294
ENST00000552499 MARS-029 nonsense_mediated_decay Homo_sapiens 0 529
ENST00000552914 MARS-030 protein_coding Homo_sapiens 0 394

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