C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: breast carcinoma amplified sequence 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135017 Bcas2-002 ENSMUSG00000005687 10090 + 3:103171772-103179166 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000135017
Transcript ID Testis
ENSMUST00000135017 17.588±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RY CIL_0003RY_0002 CGP 3:103102604-103179166
CIL_0006WV CIL_0006WV_0002 CGP 3:103171655-103358768

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369541 BCAS2-001 protein_coding Homo_sapiens 0 612
ENST00000416374 BCAS2P3-001 processed_pseudogene Homo_sapiens 0 372
ENST00000425064 BCAS2P2-001 processed_pseudogene Homo_sapiens 0 542
ENST00000485021 BCAS2-002 processed_transcript Homo_sapiens 0 508

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