C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Kv channel-interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135034 Kcnip1-004 ENSMUSG00000053519 10090 - 11:33641504-33992988 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartKidneyLiverMuscleOvaryENSMUST00000135034
Transcript ID Adipose Adrenal Colon Heart Kidney Liver Muscle Ovary
ENSMUST00000135034 1.020±0.00 0.065±0.00 0.837±0.21 0.021±0.01 0.026±0.00 0.014±0.00 0.018±0.00 0.244±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088M CIL_00088M_0002 VISTA 11:33042866-33643782
CIL_000977 CIL_000977_0002 VISTA 11:33092412-33693558
CIL_00098H CIL_00098H_0002 VISTA 11:33099828-33701076
CIL_0008SG CIL_0008SG_0002 VISTA 11:33129906-33731024
CIL_00023U CIL_00023U_0002 CGP 11:33629339-33993152

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328939 KCNIP1-001 protein_coding Homo_sapiens 0 340
ENST00000377360 KCNIP1-005 protein_coding Homo_sapiens 0 366
ENST00000390656 KCNIP1-201 protein_coding Homo_sapiens 0 248
ENST00000411494 KCNIP1-004 protein_coding Homo_sapiens 0 340
ENST00000434108 KCNIP1-003 protein_coding Homo_sapiens 0 248
ENST00000517344 KCNIP1-007 nonsense_mediated_decay Homo_sapiens 0 228
ENST00000518527 KCNIP1-006 processed_transcript Homo_sapiens 0 228
ENST00000520740 KCNIP1-002 protein_coding Homo_sapiens 0 340
ENST00000616807 KCNIP1-202 protein_coding Homo_sapiens 0 340

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