C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEK oncogene (DNA binding)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135278 Dek-002 ENSMUSG00000021377 10090 - 13:47088595-47106201 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000135278
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000135278 29.738±15.56 13.686±0.94 10.592±3.61 4.270±0.76 4.608±1.96 6.881±2.11 25.564±13.83 1.858±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090E CIL_00090E_0002 VISTA 13:46584783-47186478
CIL_0008X6 CIL_0008X6_0002 VISTA 13:47010584-47612217
CIL_0003RV CIL_0003RV_0002 CGP 13:47043499-47106201
CIL_0007V4 CIL_0007V4_0002 VISTA 13:47067148-47669233
CIL_00041Y CIL_00041Y_0002 CGP 13:47084775-47247991

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0043292 IDA contractile fiber
GO:2001032 IMP regulation of double-strand break repair via nonhomologous end joining

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244776 DEK-002 protein_coding Homo_sapiens 0 460
ENST00000397239 DEK-001 protein_coding Homo_sapiens 0 676
ENST00000503715 DEK-005 protein_coding Homo_sapiens 0 573
ENST00000505224 DEK-003 nonsense_mediated_decay Homo_sapiens 0 418
ENST00000512145 DEK-008 retained_intron Homo_sapiens 0 196
ENST00000515742 DEK-006 protein_coding Homo_sapiens 0 483
ENST00000515770 DEK-007 nonsense_mediated_decay Homo_sapiens 0 283

Loading