C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135399 Usp16-007 ENSMUSG00000025616 10090 + 16:87472854-87479913 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CH CIL_0003CH_0002 CGP 16:87433407-87483517
CIL_000313 CIL_000313_0002 CGP 16:87454703-87495873

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299727 GALR1-001 protein_coding Homo_sapiens 0.0007 53
ENST00000321341 ME2-001 protein_coding Homo_sapiens 0.0002 55
ENST00000334352 USP16-003 protein_coding Homo_sapiens 0 604
ENST00000340533 CYB5A-001 protein_coding Homo_sapiens 0.0002 53
ENST00000352998 ZNF383-001 protein_coding Homo_sapiens 0.0004 53
ENST00000399975 USP16-001 protein_coding Homo_sapiens 0 604
ENST00000399976 USP16-002 protein_coding Homo_sapiens 0 604
ENST00000459648 CEACAM19-004 retained_intron Homo_sapiens 0.0002 53
ENST00000473022 MYH9-007 retained_intron Homo_sapiens 0.00002 53
ENST00000474835 USP16-004 retained_intron Homo_sapiens 0 531
ENST00000477222 MLPH-011 processed_transcript Homo_sapiens 0.00004 53
ENST00000479770 TIRAP-008 nonsense_mediated_decay Homo_sapiens 0.00004 55
ENST00000485767 GSN-011 processed_transcript Homo_sapiens 0.00003 57
ENST00000492996 HERC4-006 protein_coding Homo_sapiens 0.00000003 66
ENST00000493844 DNAH7-005 retained_intron Homo_sapiens 0.000003 57
ENST00000515210 ERC1-012 processed_transcript Homo_sapiens 0.00000006 62
ENST00000526353 SBF2-004 retained_intron Homo_sapiens 0.0000006 62
ENST00000527839 KMT2A-013 retained_intron Homo_sapiens 0.00004 55
ENST00000532399 NDUFS8-003 retained_intron Homo_sapiens 0.0002 53
ENST00000563287 RP11-10O17.1-002 processed_transcript Homo_sapiens 0.0002 53
ENST00000592891 TMEM150B-007 retained_intron Homo_sapiens 0.00008 53
ENST00000614859 C1orf158-001 protein_coding Homo_sapiens 0.0002 53

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