C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methyltransferase like 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135487 Mettl5-003 ENSMUSG00000051730 10090 - 2:69877748-69885604 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLiverLungOvaryTestisENSMUST00000135487
Transcript ID Adipose Adrenal Breast Heart Kidney Liver Lung Ovary Testis
ENSMUST00000135487 1.266±0.14 1.337±0.00 1.164±0.31 0.911±0.53 0.616±0.15 0.735±0.07 1.025±0.35 0.867±0.43 0.908±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VY CIL_0007VY_0002 VISTA 2:69698509-70299848
CIL_0004SC CIL_0004SC_0002 CGP 2:69821944-69871846
CIL_0004SJ CIL_0004SJ_0002 CGP 2:69861562-69885615
CIL_0004SI CIL_0004SI_0002 CGP 2:69871198-70024013

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260953 METTL5-001 protein_coding Homo_sapiens 0 693
ENST00000308099 METTL5-010 protein_coding Homo_sapiens 0 568
ENST00000392640 METTL5-002 protein_coding Homo_sapiens 0 693
ENST00000409340 METTL5-006 protein_coding Homo_sapiens 6e-37 158
ENST00000409837 METTL5-005 protein_coding Homo_sapiens 0 693
ENST00000409965 METTL5-003 protein_coding Homo_sapiens 0 693
ENST00000410097 METTL5-004 protein_coding Homo_sapiens 0 693
ENST00000442181 METTL5-008 protein_coding Homo_sapiens 0 315
ENST00000460061 SPOCD1-004 retained_intron Homo_sapiens 0.000004 58
ENST00000468720 SPOCD1-006 retained_intron Homo_sapiens 0.000004 58
ENST00000471560 METTL5-007 retained_intron Homo_sapiens 7e-37 158
ENST00000485944 SPOCD1-002 retained_intron Homo_sapiens 0.000004 58
ENST00000505008 RP11-390G14.1-001 processed_pseudogene Homo_sapiens 0 403
ENST00000538491 METTL5-011 protein_coding Homo_sapiens 3e-37 158
ENST00000555980 RP11-316E14.2-001 processed_pseudogene Homo_sapiens 0 558
ENST00000614043 METTL5-201 protein_coding Homo_sapiens 0 680

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