C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 5830417I10 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135913 5830417I10Rik-001 ENSMUSG00000078684 10090 + 3:88775216-88825587 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000135913
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000135913 2.627±0.00 2.014±0.31 1.784±0.03 2.328±0.59 2.119±0.00 1.375±0.43 2.549±0.00 1.035±0.19 0.923±0.09 2.217±0.94 1.823±0.33 3.290±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000271883 GON4L-018 protein_coding Homo_sapiens 0 1711
ENST00000295566 YY1AP1-043 protein_coding Homo_sapiens 0 815
ENST00000311573 YY1AP1-032 protein_coding Homo_sapiens 0 815
ENST00000347088 YY1AP1-040 protein_coding Homo_sapiens 0 1585
ENST00000354691 YY1AP1-031 nonsense_mediated_decay Homo_sapiens 0 883
ENST00000355499 YY1AP1-034 protein_coding Homo_sapiens 0 1585
ENST00000359205 YY1AP1-027 protein_coding Homo_sapiens 0 1587
ENST00000361040 GON4L-001 protein_coding Homo_sapiens 0 1711
ENST00000361140 YY1AP1-047 nonsense_mediated_decay Homo_sapiens 0 1559
ENST00000361831 YY1AP1-025 protein_coding Homo_sapiens 0 1589
ENST00000368330 YY1AP1-044 protein_coding Homo_sapiens 0 1585
ENST00000368331 GON4L-201 protein_coding Homo_sapiens 0 1711
ENST00000368339 YY1AP1-201 protein_coding Homo_sapiens 0 1585
ENST00000368340 YY1AP1-024 protein_coding Homo_sapiens 0 815
ENST00000404643 YY1AP1-046 protein_coding Homo_sapiens 0 815
ENST00000405763 YY1AP1-042 protein_coding Homo_sapiens 0 1035
ENST00000407221 YY1AP1-045 protein_coding Homo_sapiens 0 815
ENST00000436865 YY1AP1-037 nonsense_mediated_decay Homo_sapiens 0 1483
ENST00000437809 GON4L-019 protein_coding Homo_sapiens 0 1711
ENST00000442834 YY1AP1-036 retained_intron Homo_sapiens 0 1079
ENST00000443231 YY1AP1-035 protein_coding Homo_sapiens 0 627
ENST00000454523 YY1AP1-041 protein_coding Homo_sapiens 0 508
ENST00000466366 YY1AP1-030 processed_transcript Homo_sapiens 0 257
ENST00000471341 GON4L-002 processed_transcript Homo_sapiens 0 1711
ENST00000476027 YY1AP1-028 processed_transcript Homo_sapiens 0 322
ENST00000476093 YY1AP1-033 processed_transcript Homo_sapiens 0 514
ENST00000477470 YY1AP1-038 processed_transcript Homo_sapiens 0 311
ENST00000482386 GON4L-014 processed_transcript Homo_sapiens 1.4013e-45 187
ENST00000488251 GON4L-016 processed_transcript Homo_sapiens 2e-24 117
ENST00000488784 YY1AP1-026 processed_transcript Homo_sapiens 0 592
ENST00000490801 GON4L-011 processed_transcript Homo_sapiens 0 571
ENST00000493625 YY1AP1-039 processed_transcript Homo_sapiens 0 508
ENST00000496021 GON4L-010 processed_transcript Homo_sapiens 0 313
ENST00000496324 YY1AP1-029 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000497369 GON4L-008 processed_transcript Homo_sapiens 0 1088
ENST00000500626 RP11-29H23.5-001 unprocessed_pseudogene Homo_sapiens 0 460
ENST00000615926 GON4L-202 protein_coding Homo_sapiens 0 1711
ENST00000620426 GON4L-203 protein_coding Homo_sapiens 0 1175
ENST00000622608 GON4L-204 protein_coding Homo_sapiens 0 1711

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