C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | neighbor of Brca1 gene 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000136185  |
Nbr1-007 |
ENSMUSG00000017119 |
10090 | + |
11:101555866-101559562  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00040M | CIL_00040M_0002 | CGP | 11:101488764-101581951 |
| CIL_000996 | CIL_000996_0002 | VISTA | 11:101501412-102102123 |
| CIL_00090X | CIL_00090X_0002 | VISTA | 11:101529827-102131014 |
| CIL_0000KX | CIL_0000KX_0003 | CGP | 11:101552149-101591788 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000407 | IDA | pre-autophagosomal structure |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000341165
|
NBR1-001 | protein_coding | Homo_sapiens | 8e-40 | 171 |
|
ENST00000422280
|
NBR1-201 | protein_coding | Homo_sapiens | 8.99999e-40 | 171 |
|
ENST00000542611
|
NBR1-002 | protein_coding | Homo_sapiens | 5e-40 | 171 |
|
ENST00000586650
|
NBR1-007 | protein_coding | Homo_sapiens | 9.99995e-41 | 171 |
|
ENST00000589872
|
NBR1-004 | protein_coding | Homo_sapiens | 5e-40 | 171 |
|
ENST00000590996
|
NBR1-003 | protein_coding | Homo_sapiens | 6e-40 | 171 |
|
ENST00000592304
|
NBR1-006 | retained_intron | Homo_sapiens | 2e-40 | 171 |
|
ENST00000617399
|
NBR1-202 | misc_RNA | Homo_sapiens | 0.000000000007 | 71 |
