C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: primase and polymerase (DNA-directed)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136335 Primpol-003 ENSMUSG00000038225 10090 - 8:46576162-46617200 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000136335
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000136335 0.699±0.26 1.029±0.24 0.933±0.01 0.720±0.00 0.633±0.54 0.766±0.41 0.243±0.09 0.513±0.23 1.195±0.69 0.809±0.31 0.090±0.02 1.158±0.47 1.665±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097G CIL_00097G_0002 VISTA 8:46470571-47072246
CIL_00094W CIL_00094W_0002 VISTA 8:46548055-47151393

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281453 CENPU-001 protein_coding Homo_sapiens 3e-35 154
ENST00000314970 PRIMPOL-001 protein_coding Homo_sapiens 0 638
ENST00000502461 CENPU-005 retained_intron Homo_sapiens 7e-38 161
ENST00000503752 PRIMPOL-005 protein_coding Homo_sapiens 0 638
ENST00000506278 PRIMPOL-006 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000508001 PRIMPOL-011 protein_coding Homo_sapiens 0 409
ENST00000508095 CENPU-006 retained_intron Homo_sapiens 1e-35 154
ENST00000509002 PRIMPOL-004 nonsense_mediated_decay Homo_sapiens 0 425
ENST00000509538 PRIMPOL-008 retained_intron Homo_sapiens 3.00018e-42 176
ENST00000510146 CENPU-003 nonsense_mediated_decay Homo_sapiens 3e-35 154
ENST00000512834 PRIMPOL-002 protein_coding Homo_sapiens 0 625
ENST00000515152 PRIMPOL-007 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000515774 PRIMPOL-003 protein_coding Homo_sapiens 0 638

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