C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family A (ABC1), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136358 Abca4-005 ENSMUSG00000028125 10090 + 3:122173115-122180061 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonLiverPlacentaENSMUST00000136358
Transcript ID Adrenal Bladder Colon Liver Placenta
ENSMUST00000136358 0.412±0.00 0.132±0.00 0.083±0.00 0.058±0.00 0.691±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DI CIL_0009DI_0002 VISTA 3:121653542-122254391
CIL_0009DJ CIL_0009DJ_0002 VISTA 3:121747471-122349247
CIL_0005PB CIL_0005PB_0003 CGP 3:121953229-122180061
CIL_0009DH CIL_0009DH_0002 VISTA 3:121992915-122594267

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370225 ABCA4-001 protein_coding Homo_sapiens 0 398
ENST00000536513 ABCA4-201 protein_coding Homo_sapiens 0 398

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