C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: beclin 1, autophagy related
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136535 Becn1-008 ENSMUSG00000035086 10090 - 11:101288888-101294041 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SB CIL_0005SB_0002 CGP 11:101277968-101296317
CIL_0005S8 CIL_0005S8_0002 CGP 11:101279012-101302286
CIL_0005S9 CIL_0005S9_0002 CGP 11:101285952-101323537

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315066 CNTD1-003 processed_transcript Homo_sapiens 8e-38 163
ENST00000361523 BECN1-002 protein_coding Homo_sapiens 0 370
ENST00000438274 BECN1-003 protein_coding Homo_sapiens 0 346
ENST00000543382 BECN1-004 retained_intron Homo_sapiens 0 370
ENST00000586589 BECN1-019 protein_coding Homo_sapiens 0 346
ENST00000586754 BECN1-013 processed_transcript Homo_sapiens 0 298
ENST00000587880 BECN1-020 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000588276 BECN1-021 protein_coding Homo_sapiens 8e-38 161
ENST00000589492 BECN1-016 retained_intron Homo_sapiens 0 309
ENST00000589663 BECN1-017 protein_coding Homo_sapiens 6e-37 158
ENST00000590099 BECN1-001 protein_coding Homo_sapiens 0 370
ENST00000590185 BECN1-022 retained_intron Homo_sapiens 0 401
ENST00000590764 BECN1-018 protein_coding Homo_sapiens 0 370
ENST00000617806 BECN1-005 retained_intron Homo_sapiens 0 401

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