C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transducin-like enhancer of split 1, homolog of Drosophila E(spl)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137075 Tle1-007 ENSMUSG00000008305 10090 - 4:72158272-72199492 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000137075
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000137075 20.770±0.00 30.617±0.00 6.732±1.46 3.806±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KE CIL_0007KE_0004 UCNEbase 4:70810873-73489292
CIL_00090V CIL_00090V_0002 VISTA 4:71539683-72141070
CIL_0008X3 CIL_0008X3_0002 VISTA 4:71768926-72369840
CIL_0009AO CIL_0009AO_0002 VISTA 4:71866327-72468960
CIL_0008C4 CIL_0008C4_0002 VISTA 4:71896487-72497365
CIL_0008TV CIL_0008TV_0002 VISTA 4:72081989-72683115

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003682 IDA chromatin binding
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006357 IGI regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376463 TLE1-005 protein_coding Homo_sapiens 0 686
ENST00000376472 TLE1-201 protein_coding Homo_sapiens 0 793
ENST00000376499 TLE1-001 protein_coding Homo_sapiens 0 793
ENST00000418319 TLE1-002 protein_coding Homo_sapiens 0 584
ENST00000422965 TLE1P1-001 processed_pseudogene Homo_sapiens 0 749

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