C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | GTPase activating RANGAP domain-like 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000137381  |
Garnl3-008 |
ENSMUSG00000038860 |
10090 | - |
2:33054158-33131436  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008YA | CIL_0008YA_0002 | VISTA | 2:32608279-33209524 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005083 | IEA | small GTPase regulator activity |
| GO:0005096 | IEA | GTPase activator activity |
| GO:0005575 | ND | cellular_component |
| GO:0008150 | ND | biological_process |
| GO:0043547 | IEA | positive regulation of GTPase activity |
| GO:0051056 | IEA | regulation of small GTPase mediated signal transduction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000373386
|
GARNL3-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 2996 |
|
ENST00000373387
|
GARNL3-003 | protein_coding | Homo_sapiens | 0 | 3792 |
|
ENST00000425970
|
GARNL3-012 | protein_coding | Homo_sapiens | 0 | 645 |
|
ENST00000429629
|
GARNL3-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 527 |
|
ENST00000435213
|
GARNL3-201 | protein_coding | Homo_sapiens | 0 | 3792 |
|
ENST00000439286
|
GARNL3-005 | protein_coding | Homo_sapiens | 0 | 1074 |
|
ENST00000441134
|
GARNL3-018 | nonsense_mediated_decay | Homo_sapiens | 0 | 734 |
|
ENST00000444677
|
GARNL3-016 | protein_coding | Homo_sapiens | 0 | 558 |
|
ENST00000446764
|
GARNL3-009 | protein_coding | Homo_sapiens | 0 | 449 |
|
ENST00000460176
|
GARNL3-022 | nonsense_mediated_decay | Homo_sapiens | 0 | 420 |
|
ENST00000463005
|
GARNL3-010 | retained_intron | Homo_sapiens | 0 | 440 |
|
ENST00000464616
|
GARNL3-015 | processed_transcript | Homo_sapiens | 0 | 566 |
|
ENST00000478702
|
GARNL3-019 | processed_transcript | Homo_sapiens | 0 | 645 |
|
ENST00000481242
|
GARNL3-013 | retained_intron | Homo_sapiens | 0 | 1194 |
|
ENST00000481875
|
GARNL3-014 | retained_intron | Homo_sapiens | 0 | 390 |
|
ENST00000487565
|
GARNL3-021 | processed_transcript | Homo_sapiens | 0 | 255 |
|
ENST00000495172
|
GARNL3-007 | retained_intron | Homo_sapiens | 0 | 893 |
|
ENST00000496711
|
GARNL3-004 | processed_transcript | Homo_sapiens | 0 | 1194 |
|
ENST00000497703
|
GARNL3-008 | retained_intron | Homo_sapiens | 0 | 298 |
|
ENST00000498801
|
GARNL3-020 | processed_transcript | Homo_sapiens | 0 | 632 |
