C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: recombination signal binding protein for immunoglobulin kappa J region-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137427 Rbpjl-002 ENSMUSG00000017007 10090 + 2:164403141-164414791 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000137427
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000137427 0.087±0.00 0.164±0.11 1.125±0.59 0.026±0.00 0.054±0.00 0.022±0.01 9.804±3.48 0.020±0.00 0.019±0.00 0.021±0.00 0.031±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V4 CIL_0003V4_0002 CGP 2:164354070-164405160
CIL_0003L4 CIL_0003L4_0002 CGP 2:164389393-164415448
CIL_0003L5 CIL_0003L5_0002 CGP 2:164403141-164443887

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343694 RBPJL-002 protein_coding Homo_sapiens 0 1048
ENST00000372741 RBPJL-003 protein_coding Homo_sapiens 0 1002
ENST00000372743 RBPJL-001 protein_coding Homo_sapiens 0 1027
ENST00000464504 RBPJL-004 protein_coding Homo_sapiens 0 466
ENST00000622729 RBPJL-005 retained_intron Homo_sapiens 0 579

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