C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 105kDa/110kDa protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137534 Hsph1-003 ENSMUSG00000029657 10090 - 5:149620682-149636338 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000137534
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000137534 1.841±0.04 2.696±0.77 0.972±0.21 0.858±0.11 1.537±0.03 1.097±0.10 1.103±0.50 4.277±0.81 1.073±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UA CIL_0007UA_0002 VISTA 5:149020224-149622595
CIL_0004GB CIL_0004GB_0002 CGP 5:149528679-149636376
CIL_0000PA CIL_0000PA_0003 CGP 5:149614287-149762599

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320027 HSPH1-001 protein_coding Homo_sapiens 0 1993
ENST00000380405 HSPH1-002 protein_coding Homo_sapiens 0 1783
ENST00000445273 HSPH1-201 protein_coding Homo_sapiens 0 1179
ENST00000602786 HSPH1-003 nonsense_mediated_decay Homo_sapiens 0 1402

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