C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000137552  |
Fscn1-005 |
ENSMUSG00000029581 |
10090 | + |
5:142963250-142971953  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000854 | CIL_000854_0002 | VISTA | 5:142700569-143309825 |
| CIL_0002V8 | CIL_0002V8_0002 | CGP | 5:142903115-142973185 |
| CIL_00027J | CIL_00027J_0003 | CGP | 5:142960343-143113020 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0030175 | IDA | filopodium |
| GO:0030674 | IEA | protein binding, bridging |
| GO:0051015 | IMP | actin filament binding |
| GO:0051017 | IDA | actin filament bundle assembly |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000382361
|
FSCN1-001 | protein_coding | Homo_sapiens | 0 | 641 |
|
ENST00000405801
|
FSCN1-005 | protein_coding | Homo_sapiens | 0 | 527 |
|
ENST00000444748
|
FSCN1-003 | protein_coding | Homo_sapiens | 0 | 514 |
|
ENST00000447103
|
FSCN1-004 | protein_coding | Homo_sapiens | 0 | 472 |
|
ENST00000473330
|
FSCN1-002 | retained_intron | Homo_sapiens | 0 | 645 |
|
ENST00000568912
|
FSCN1P1-001 | processed_pseudogene | Homo_sapiens | 0 | 529 |
