C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: FYVE, RhoGEF and PH domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137644 Fgd2-005 ENSMUSG00000024013 10090 + 17:29368967-29374984 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000137644
Transcript ID Placenta
ENSMUST00000137644 0.254±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089L CIL_00089L_0002 VISTA 17:29133661-29735358
CIL_0002Y4 CIL_0002Y4_0002 CGP 17:29332072-29379660
CIL_0002Y3 CIL_0002Y3_0002 CGP 17:29360914-29496111

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274963 FGD2-001 protein_coding Homo_sapiens 0 490
ENST00000373535 FGD2-003 nonsense_mediated_decay Homo_sapiens 0 464
ENST00000375135 FGD1-001 protein_coding Homo_sapiens 0.00000004 66
ENST00000464083 FGD2-006 retained_intron Homo_sapiens 0 490
ENST00000487920 FGD2-010 retained_intron Homo_sapiens 3.00018e-42 178
ENST00000493635 FGD2-009 retained_intron Homo_sapiens 0 470
ENST00000494343 FGD2-007 retained_intron Homo_sapiens 0 490

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